Index _ | A | B | C | D | E | F | G | H | I | J | K | L | M | N | O | P | Q | R | S | T | U | V | W | X | Y | Z _ __call__() (OutboardMidplaneMap method) (SplineInterpolator2D method) __getitem__() (CriticalPointType class method) (DistrictType class method) (EquiType class method) (FlareEquiType class method) (Grid3D method) (Hierarchy method) (Map3D method) (Normalization method), [1] (OrderedPolygon2D method) (PoincarePolygonSet method) (Polygon2D method) (TArray method) __init__() (AtomicData method) (CircularEquilibrium method) (CircularToroidalEquilibrium method) (CriticalPoint method) (DommaschkEquilibrium method) (EquiOnMesh method) (FastTracer method) (FlareEquilibrium method) (FluxSurfaceLineout method) (Grid2D method) (Grid3D method) (Hierarchy method) (Lineout method) (LineoutSet method) (MagneticFieldTracer method) (Map method) (Map3D method) (Mesh method) (Multigrid2D method) (Normalization method), [1] (NumericalEquilibrium method) (OrderedPolygon2D method) (OutboardMidplaneMap method) (Penalization method) (PoincarePolygonSet method) (Polars method) (Polygon2D method) (Polygon3D method) (RateCoefficient method) (RawNumericalEquilibrium method) (SalphaEquilibrium method) (SlabEquilibrium method) (SplineInterpolator2D method) (TArray method) (VectorFieldTracer method) (XPointLineout method) __len__() (CriticalPointType class method) (DistrictType class method) (EquiType class method) (FlareEquiType class method) (Map3D method) (TArray method) __str__() (CriticalPointType method) (DistrictType method) (EquiType method) (FlareEquiType method) A abs() (TArray method) absolute() (TArray method) add() (TArray method) add_flux_limit_polygon() (RawNumericalEquilibrium method) all() (TArray method) allclose() (TArray method) any() (TArray method) apply_psi_filter() (RawNumericalEquilibrium method) arccos() (TArray method) arccosh() (TArray method) arclength (OrderedPolygon2D property) arcsin() (TArray method) arcsinh() (TArray method) arctan() (TArray method) arctan2() (TArray method) arctanh() (TArray method) argmax() (TArray method) argmin() (TArray method) argwhere() (TArray method) as_dict() (Hierarchy method) (Normalization method), [1] assign_coords() (TArray method) AtomicData (class in torx.specializations.grillix) auto_chunk() (in module torx.performance) autocoord_function() (in module torx.decorators) autocoord_method() (in module torx.decorators) autodoc_function() (in module torx.decorators) autodoc_module() (in module torx) (in module torx.analysis) (in module torx.analysis.fourier) (in module torx.analysis.lineouts) (in module torx.arrays) (in module torx.decorators) (in module torx.equilibrium) (in module torx.equilibrium.io) (in module torx.fileio) (in module torx.geometry) (in module torx.grid) (in module torx.measure) (in module torx.measure.fluid) (in module torx.measure.gyrokinetic) (in module torx.normalization) (in module torx.operators) (in module torx.performance) (in module torx.plotting) (in module torx.specializations) (in module torx.specializations.aug) (in module torx.specializations.flare) (in module torx.specializations.genex) (in module torx.specializations.grillix) (in module torx.specializations.reax) (in module torx.units) (in module torx.vector) AutoDocClass (in module torx.decorators) AutoDocEnum (in module torx.decorators) autogrid_function() (in module torx.decorators) autogrid_method() (in module torx.decorators) avg() (in module torx.analysis) axis_Btor (NumericalEquilibrium property) (RawNumericalEquilibrium property) axis_Btor_norm (NumericalEquilibrium property) (RawNumericalEquilibrium property) axis_phi (DommaschkEquilibrium property) (FlareEquilibrium property) axis_r() (FlareEquilibrium method) axis_r_flare (FlareEquilibrium property) axis_r_norm (CircularEquilibrium property) (CircularToroidalEquilibrium property) (DommaschkEquilibrium property) (EquilibriumBaseClass property) (FlareEquilibrium property) (NumericalEquilibrium property) (RawNumericalEquilibrium property) (SalphaEquilibrium property) (SlabEquilibrium property) axis_z() (FlareEquilibrium method) axis_z_flare (FlareEquilibrium property) axis_z_norm (CircularEquilibrium property) (CircularToroidalEquilibrium property) (DommaschkEquilibrium property) (EquilibriumBaseClass property) (FlareEquilibrium property) (NumericalEquilibrium property) (RawNumericalEquilibrium property) (SalphaEquilibrium property) (SlabEquilibrium property) B B0 (CircularEquilibrium property) (CircularToroidalEquilibrium property) (DommaschkEquilibrium property) (EquilibriumBaseClass property) (FlareEquilibrium property) (NumericalEquilibrium property) (RawNumericalEquilibrium property) (SalphaEquilibrium property) (SlabEquilibrium property) basis_from_unstructured_array() (Grid2D method) (Multigrid2D method) beta_0 (Normalization property), [1] bidirectional_toroidal_trace() (in module torx.analysis) boundary_indices (Mesh property) broadcast_like() (TArray method) bspline_basis_and_deriv1() (in module torx.analysis) btor (EquiOnMesh property) Btor0 (FlareEquilibrium property) Btor_axis() (FlareEquilibrium method) build_grid_from_filepath_genex() (in module torx.specializations.genex) build_grid_genex() (in module torx.specializations.genex) bx (EquiOnMesh property) by (EquiOnMesh property) C c_s0 (Normalization property), [1] cached_until_changed() (in module torx.decorators) cart_i (Mesh property) cart_j (Mesh property) cart_to_polar() (Polars method) cbrt() (TArray method) ceil() (TArray method) centroid (OrderedPolygon2D property) charfun (Penalization property) charfun_at_target (Penalization property) charfun_parwidth (Penalization property) charfun_radlimwidth (Penalization property) check_equilibrium() (in module torx.equilibrium) check_flux_surface_wander() (MagneticFieldTracer method) check_port_in_use() (in module torx.performance) check_storage_integrity() (in module storx) check_units() (in module torx.normalization) (in module torx.units) chipar_e (Normalization property), [1] chipar_i (Normalization property), [1] chunk() (TArray method) chunked_frequency_analysis() (in module torx.analysis.fourier) CircularEquilibrium (class in torx.equilibrium) CircularToroidalEquilibrium (class in torx.equilibrium) clear_cached_properties() (Grid3D method) (Map3D method) (OrderedPolygon2D method) (Polygon2D method) clip() (TArray method) colormap() (in module torx.plotting) combine_obj_list() (in module torx.arrays) combine_quants_on_radial_lineouts() (in module torx.analysis.lineouts) compute() (RateCoefficient method) (TArray method) compute_arc_length() (in module torx.geometry) conjugate() (TArray method) convert_base_field_to_SI() (in module torx.measure) convert_base_fields_to_SI() (in module torx.measure) convert_distance_to_rho() (OutboardMidplaneMap method) convert_length_to_normalized() (CircularEquilibrium method) (CircularToroidalEquilibrium method) (DommaschkEquilibrium method) (EquilibriumBaseClass method) (FlareEquilibrium method) (NumericalEquilibrium method) (RawNumericalEquilibrium method) (SalphaEquilibrium method) (SlabEquilibrium method) convert_ncgroup_to_matrix() (in module torx.specializations.grillix) convert_norm() (Normalization method), [1] convert_rho_to_distance() (OutboardMidplaneMap method) convert_to_bytes() (in module torx.performance) convert_xarray_to_quantity() (in module torx.normalization) (in module torx.units) coords (TArray property) coords_like() (Grid2D method) (Multigrid2D method) copy() (TArray method) cos() (TArray method) cosh() (TArray method) Coulomb_logarithm_ee() (Normalization method), [1] create_empty() (RawNumericalEquilibrium method) create_hierarchy_from_storage() (in module storx.hierarchy) create_physical_parameters_dict_from_filepath_genex() (in module torx.specializations.genex) CriticalPoint (class in torx.analysis) CriticalPointType (class in torx.analysis) cross_spectrum_analysis() (in module torx.analysis.fourier) csr_operator() (in module torx.specializations.grillix) cumprod() (TArray method) cumsum() (TArray method) cumulative_trapezoid() (TArray method) cylindrical_vector() (in module torx.vector) D delta (Normalization property), [1] denormalize() (TArray method) denormalized_values (TArray property) deserialize_norm_attrs() (in module torx.arrays) deserialize_Quantity() (in module torx.normalization) (in module torx.units) deta_drho() (CircularToroidalEquilibrium method) deta_dtheta() (CircularToroidalEquilibrium method) diagnose_poincare() (in module torx.analysis) diamagnetic_heat_flux() (in module torx.measure) (in module torx.measure.gyrokinetic) diamagnetic_heat_flux_maxw() (in module torx.measure) (in module torx.measure.gyrokinetic) diamagnetic_particle_flux() (in module torx.measure) (in module torx.measure.gyrokinetic) diamagnetic_particle_flux_maxw() (in module torx.measure) (in module torx.measure.gyrokinetic) diamagnetic_velocity() (in module torx.measure) diff() (TArray method) dims (TArray property) direction (MagneticFieldTracer property) (VectorFieldTracer property) dirindfun (Penalization property) dirindfun_parwidth (Penalization property) district (EquiOnMesh property) (Mesh property) DistrictType (class in torx.grid) div() (in module torx.operators) divide() (TArray method) DommaschkEquilibrium (class in torx.equilibrium) dpar_bwd_full (Map property) (Map3D property) dpar_bwd_full_stag (Map property) (Map3D property) dpar_bwd_half (Map property) (Map3D property) dpar_bwd_half_stag (Map property) (Map3D property) dpar_fwd_full (Map property) (Map3D property) dpar_fwd_full_stag (Map property) (Map3D property) dpar_fwd_half (Map property) (Map3D property) dpar_fwd_half_stag (Map property) (Map3D property) dphi (Map property) (Penalization property) dphi_max (Penalization property) dradenv_drho() (CircularToroidalEquilibrium method) drho (Polars property) drift_flux() (in module torx.analysis) drift_scale() (in module torx.measure) drop_vars() (TArray method) dtheta (Polars property) E eich_profile() (in module torx.analysis) electric_field() (in module torx.measure) electromagnetic_heat_flux() (in module torx.measure) electron_pressure() (in module torx.measure) electrostatic_ExB_heat_flux() (in module torx.measure) entry_exists() (in module storx) ePhi_unit_vector() (in module torx.vector) epol (EquiOnMesh property) eqdsk_info() (in module torx.equilibrium.io) equal() (TArray method) equally_sampled_data() (in module torx.analysis.fourier) equally_sampled_interval() (in module torx.analysis.fourier) equilibrium_from_file() (in module torx.equilibrium.io) EquilibriumBaseClass (class in torx.equilibrium) EquiOnMesh (class in torx.specializations.grillix) EquiType (class in torx.equilibrium) eR_unit_vector() (in module torx.vector) erad (EquiOnMesh property) eta() (CircularToroidalEquilibrium method) etapar_e (Normalization property), [1] etapar_i (Normalization property), [1] evaluate_rate_coeff() (AtomicData method) ExB_velocity() (in module torx.measure) excess_kurtosis() (in module torx.analysis) exp() (TArray method) expand_dims() (TArray method) expm1() (TArray method) export_to_eqdsk() (in module torx.equilibrium) eZ_unit_vector() (in module torx.vector) F FastTracer (class in torx.analysis) filepath_resolver() (in module torx.fileio) fillna() (TArray method) find_contours() (in module torx.analysis) find_critical_point() (in module torx.analysis) find_extremum() (in module torx.analysis) find_nearest_index() (in module torx.arrays) find_neighboring_points() (MagneticFieldTracer method) find_points_from_poloidal_trace() (FluxSurfaceLineout method) find_points_from_toroidal_trace() (FluxSurfaceLineout method) find_points_on_grid() (Lineout method) (LineoutSet method) (XPointLineout method) first_self_intersection() (in module torx.geometry) fit_eich_profile() (in module torx.analysis) flare_fieldline_trace() (in module torx.analysis) FlareEquilibrium (class in torx.equilibrium) FlareEquiType (class in torx.equilibrium) flip_Z() (NumericalEquilibrium method) (OrderedPolygon2D method) (Polygon2D method) (RawNumericalEquilibrium method) floating_potential() (in module torx.measure) floor() (TArray method) flux_surf_avg_3D() (in module torx.analysis) flux_surface_average() (Polars method) fluxbox_vol (Map property) (Map3D property) fluxbox_vol_stag (Map property) (Map3D property) FluxSurfaceLineout (class in torx.analysis.lineouts) fmax() (TArray method) fmin() (TArray method) fourier_analysis() (in module torx.analysis.fourier) fourier_frequencies() (in module torx.analysis.fourier) fourier_transform_1d() (in module torx.analysis.fourier) free() (FlareEquilibrium method) free_active_flare_equilibrium() (in module torx.equilibrium) frequency_analysis() (in module torx.analysis.fourier) from_2d_array() (OrderedPolygon2D method) (Polygon2D method) from_dict() (RawNumericalEquilibrium method) from_file() (PoincarePolygonSet method) from_filepath() (EquiOnMesh class method) (Map class method) (Penalization class method) (Polars class method) from_multigrid_files() (Grid3D method) from_rz() (Grid3D method) from_torx_poincare() (PoincarePolygonSet method) full_to_inner() (in module torx.grid) funcptr (FastTracer property) G get_active_hierarchy() (in module storx) (in module storx.hierarchy) get_all_keys() (Hierarchy method) get_boundary_polygon() (CircularEquilibrium method) (CircularToroidalEquilibrium method) (DommaschkEquilibrium method) (EquilibriumBaseClass method) (FlareEquilibrium method) (NumericalEquilibrium method) (RawNumericalEquilibrium method) (SalphaEquilibrium method) (SlabEquilibrium method) get_chunk_limit() (in module torx.performance) get_git_email() (in module torx.performance) get_git_hash() (in module torx.performance) get_grid() (Multigrid2D method) get_limiter_polygon() (NumericalEquilibrium method) (RawNumericalEquilibrium method) get_magnetic_field_genex() (in module torx.specializations.genex) get_mem_avail() (in module torx.performance) get_mem_summary() (in module torx.performance) get_mem_user() (in module torx.performance) get_mesh() (Multigrid2D method) get_modifier_hierarchy() (in module storx) (in module storx.hierarchy) get_next_free_port() (in module torx.performance) get_num_cores() (in module torx.performance) get_num_cores_phys() (in module torx.performance) get_phi_grid_genex() (in module torx.specializations.genex) get_plane() (Map3D method) get_separatrix() (CircularEquilibrium method) (CircularToroidalEquilibrium method) (DommaschkEquilibrium method) (EquilibriumBaseClass method) (FlareEquilibrium method) (NumericalEquilibrium method) (RawNumericalEquilibrium method) (SalphaEquilibrium method) (SlabEquilibrium method) get_storage_metadata() (in module storx) get_unstructured_index() (Grid2D method) (Multigrid2D method) get_user() (in module torx.performance) get_velocity_space_grid_genex() (in module torx.specializations.genex) ghost_indices (Mesh property) grad() (in module torx.operators) gradient() (TArray method) gradlog() (TArray method) gradshaf_star() (NumericalEquilibrium method) (RawNumericalEquilibrium method) greater() (TArray method) greater_equal() (TArray method) Grid2D (class in torx.grid) Grid3D (class in torx.grid) grid_2d_from_multigrid_file() (in module torx.specializations.grillix) grid_array (Grid3D property) H has_padding() (Grid2D method) (Multigrid2D method) hash_array() (in module storx) helicity_shift() (FluxSurfaceLineout method) hermite_order (Penalization property) Hierarchy (class in storx.hierarchy) hypot() (TArray method) I imag() (TArray method) import_aug() (in module torx.specializations.aug) import_flare() (in module torx.specializations.flare) index_neighbor (Mesh property) initialize_equi_from_params() (in module torx.equilibrium) initialize_equilibrium_from_filepath() (in module torx.specializations) initialize_from_equi_file() (NumericalEquilibrium method) (RawNumericalEquilibrium method) initialize_from_file() (Polygon3D method) initialize_from_normalization_file() (Normalization method), [1] initialize_from_params() (NumericalEquilibrium method) (RawNumericalEquilibrium method) initialize_from_rho_value() (FluxSurfaceLineout method) initialize_from_yaml() (Hierarchy class method) initialize_genex_from_filepath() (in module torx.specializations.genex) initialize_grillix_from_filepath() (in module torx.specializations.grillix) initialize_grillix_multigrid() (in module torx.specializations.grillix) inner_indices (Mesh property) inner_to_full() (in module torx.grid) (Mesh method) interp() (TArray method) interpolate() (FluxSurfaceLineout method) (Lineout method) (LineoutSet method) (OrderedPolygon2D method) (XPointLineout method) intersect_lines() (in module torx.geometry) intorder (Map property) (Polars property) ion_larmor_radius() (in module torx.measure) ion_pressure() (in module torx.measure) ion_saturation_current() (in module torx.measure) is_periodic (FluxSurfaceLineout property) (Lineout property) (LineoutSet property) (XPointLineout property) is_simple() (OrderedPolygon2D method) (Polygon2D method) isclose() (TArray method) isel() (TArray method) isel_phi() (Grid3D method) isel_planes() (Grid3D method) isfinite() (TArray method) isinf() (TArray method) isnan() (TArray method) item() (TArray method) items() (Hierarchy method) J jacobian() (CircularEquilibrium method) (CircularToroidalEquilibrium method) (DommaschkEquilibrium method) (EquilibriumBaseClass method) (FlareEquilibrium method) (NumericalEquilibrium method) (RawNumericalEquilibrium method) (SalphaEquilibrium method) (SlabEquilibrium method) K k_iz() (AtomicData method) k_rec() (AtomicData method) keys() (Hierarchy method) kurtosis() (in module torx.analysis) L less() (TArray method) less_equal() (TArray method) Lineout (class in torx.analysis.lineouts) lineout_array (LineoutSet property) LineoutSet (class in torx.analysis.lineouts) lnLambda0 (Normalization property), [1] load() (TArray method) load_aug_shotfile() (in module torx.specializations.aug) load_checkpoint_genex() (in module torx.specializations.genex) load_dataset() (in module storx) load_diags() (in module torx.specializations.grillix) load_diags_from_list() (in module torx.specializations.grillix) load_diags_in_range() (in module torx.specializations.grillix) load_last_snap() (in module torx.specializations.grillix) load_single_diag() (in module torx.specializations.grillix) load_single_snap() (in module torx.specializations.grillix) load_snaps() (in module torx.specializations.grillix) load_snaps_from_list() (in module torx.specializations.grillix) load_snaps_genex() (in module torx.specializations.genex) load_snaps_in_range() (in module torx.specializations.grillix) load_snaps_neut_genex() (in module torx.specializations.genex) load_trace_genex() (in module torx.specializations.genex) log() (TArray method) log10() (TArray method) log1p() (TArray method) log2() (TArray method) logical_and() (TArray method) logical_not() (TArray method) logical_or() (TArray method) logical_xor() (TArray method) lvl (Mesh property) lvst (Mesh property) M magfield_absolute() (CircularEquilibrium method) (CircularToroidalEquilibrium method) (DommaschkEquilibrium method) (EquilibriumBaseClass method) (FlareEquilibrium method) (NumericalEquilibrium method) (RawNumericalEquilibrium method) (SalphaEquilibrium method) (SlabEquilibrium method) magfield_component_perturbation_r() (CircularToroidalEquilibrium method) magfield_component_perturbation_z() (CircularToroidalEquilibrium method) magfield_component_poloidal() (CircularEquilibrium method) (CircularToroidalEquilibrium method) (DommaschkEquilibrium method) (EquilibriumBaseClass method) (FlareEquilibrium method) (NumericalEquilibrium method) (RawNumericalEquilibrium method) (SalphaEquilibrium method) (SlabEquilibrium method) magfield_component_r() (CircularEquilibrium method) (CircularToroidalEquilibrium method) (DommaschkEquilibrium method) (EquilibriumBaseClass method) (FlareEquilibrium method) (NumericalEquilibrium method) (RawNumericalEquilibrium method) (SalphaEquilibrium method) (SlabEquilibrium method) magfield_component_toroidal() (CircularEquilibrium method) (CircularToroidalEquilibrium method) (DommaschkEquilibrium method) (EquilibriumBaseClass method) (FlareEquilibrium method) (NumericalEquilibrium method) (RawNumericalEquilibrium method) (SalphaEquilibrium method) (SlabEquilibrium method) magfield_component_z() (CircularEquilibrium method) (CircularToroidalEquilibrium method) (DommaschkEquilibrium method) (EquilibriumBaseClass method) (FlareEquilibrium method) (NumericalEquilibrium method) (RawNumericalEquilibrium method) (SalphaEquilibrium method) (SlabEquilibrium method) magfield_vector() (CircularEquilibrium method) (CircularToroidalEquilibrium method) (DommaschkEquilibrium method) (EquilibriumBaseClass method) (FlareEquilibrium method) (NumericalEquilibrium method) (RawNumericalEquilibrium method) (SalphaEquilibrium method) (SlabEquilibrium method) magfield_vector_poloidal() (CircularEquilibrium method) (CircularToroidalEquilibrium method) (DommaschkEquilibrium method) (EquilibriumBaseClass method) (FlareEquilibrium method) (NumericalEquilibrium method) (RawNumericalEquilibrium method) (SalphaEquilibrium method) (SlabEquilibrium method) magfield_vector_radial() (CircularEquilibrium method) (CircularToroidalEquilibrium method) (DommaschkEquilibrium method) (EquilibriumBaseClass method) (FlareEquilibrium method) (NumericalEquilibrium method) (RawNumericalEquilibrium method) (SalphaEquilibrium method) (SlabEquilibrium method) MagneticFieldTracer (class in torx.analysis) make_interpolation_matrix() (FluxSurfaceLineout method) (Lineout method) (XPointLineout method) make_poloidal_trace_eq() (NumericalEquilibrium method) (RawNumericalEquilibrium method) make_trace_eq() (CircularEquilibrium method) (CircularToroidalEquilibrium method) (DommaschkEquilibrium method) (FlareEquilibrium method) (NumericalEquilibrium method) (RawNumericalEquilibrium method) (SalphaEquilibrium method) (SlabEquilibrium method) make_xarray() (in module torx.arrays) Map (class in torx.specializations.grillix) Map3D (class in torx.specializations.grillix) map_to_canonical() (in module torx.specializations.grillix) (Map method) (Map3D method) map_to_canonical_3D() (in module torx.specializations.grillix) map_to_staggered() (in module torx.specializations.grillix) (Map method) (Map3D method) map_to_staggered_3D() (in module torx.specializations.grillix) map_to_target() (Lineout method) (XPointLineout method) mask_ghost_and_filler() (in module torx.specializations.genex) matrix_to_vector() (Grid2D method) (Mesh method) (Multigrid2D method) max() (TArray method) maximum() (TArray method) mbwd (Map property) (Map3D property) mbwd_full (Map property) (Map3D property) mbwd_full_stag (Map property) (Map3D property) mbwd_stag (Map property) (Map3D property) mean() (TArray method) median() (TArray method) Mesh (class in torx.grid) mfwd (Map property) (Map3D property) mfwd_full (Map property) (Map3D property) mfwd_full_stag (Map property) (Map3D property) mfwd_stag (Map property) (Map3D property) min() (TArray method) minimum() (TArray method) minor_radius() (MagneticFieldTracer method) module storx storx.hierarchy torx torx.analysis torx.analysis.fourier torx.analysis.lineouts torx.arrays torx.decorators torx.equilibrium torx.equilibrium.io torx.fileio torx.geometry torx.grid torx.measure torx.measure.fluid torx.measure.gyrokinetic torx.normalization torx.operators torx.performance torx.plotting torx.specializations torx.specializations.aug torx.specializations.flare torx.specializations.genex torx.specializations.grillix torx.specializations.reax torx.units torx.vector mu (Normalization property), [1] Multigrid2D (class in torx.grid) multigrid_reader() (in module torx.grid) multiply() (TArray method) N n_points_black (Mesh property) n_points_red (Mesh property) nanargmax() (TArray method) nanargmin() (TArray method) nanprod() (TArray method) ndim (TArray property) nearest_neighbors() (Grid2D method) (Multigrid2D method) nearest_non_collinear_neighbors() (Grid2D method) (Multigrid2D method) negative() (TArray method) normal_unit_vector (FluxSurfaceLineout property) (Lineout property) (XPointLineout property) Normalization (class in torx.normalization) (class in torx.units) normalize() (RawNumericalEquilibrium method) normalize_to_Lperp() (Normalization method), [1] normalized_flux_surface_label() (CircularEquilibrium method) (CircularToroidalEquilibrium method) (DommaschkEquilibrium method) (EquilibriumBaseClass method) (FlareEquilibrium method) (NumericalEquilibrium method) (RawNumericalEquilibrium method) (SalphaEquilibrium method) (SlabEquilibrium method) not_equal() (TArray method) nplanes (Map property) npoints (Grid3D property) nu_e0 (Normalization property), [1] nu_i0 (Normalization property), [1] NumericalEquilibrium (class in torx.equilibrium) nx_f (Mesh property) ny_f (Mesh property) O omp_mapped_distance() (Lineout method) (XPointLineout method) open_new_client() (in module torx.performance) order() (OrderedPolygon2D method) order_points() (in module torx.geometry) OrderedPolygon2D (class in torx.geometry) outboard_midplane_chord() (in module torx.analysis.lineouts) outboard_zaxis_chord() (in module torx.analysis.lineouts) OutboardMidplaneMap (class in torx.analysis.lineouts) P p_inds (Penalization property) p_rec() (AtomicData method) pad_array() (in module torx.arrays) pad_array_with_coords() (in module torx.arrays) pad_psi() (RawNumericalEquilibrium method) parallel_divergence() (in module torx.specializations.grillix) (Map method) (Map3D method) parallel_divergence_3D() (in module torx.specializations.grillix) parallel_gradient() (in module torx.specializations.grillix) (Map method) (Map3D method) parallel_gradient_3D() (in module torx.specializations.grillix) parallel_incidence() (FluxSurfaceLineout method) (Lineout method) (XPointLineout method) parallel_ion_velocity_vector() (in module torx.measure) parallel_temperature() (in module torx.measure) (in module torx.measure.gyrokinetic) pb_inds (Penalization property) pbwd (Map property) (Map3D property) Penalization (class in torx.specializations.grillix) penalization_contour() (in module torx.analysis.lineouts) penfuns_type (Penalization property) perpendicular_gradient() (FluxSurfaceLineout method) (Grid2D method) (Grid3D method) (in module torx.specializations.grillix) (Lineout method) (Multigrid2D method) (XPointLineout method) perpendicular_gradient_component() (FluxSurfaceLineout method) (Grid2D method) (Lineout method) (Multigrid2D method) (XPointLineout method) perpendicular_temperature() (in module torx.measure) (in module torx.measure.gyrokinetic) persist() (TArray method) pfwd (Map property) (Map3D property) phase_shift_analysis() (in module torx.analysis.fourier) phi (Mesh property) (Polars property) pinfo (Mesh property) plot_3D_field_lines() (in module torx.plotting) plot_magnetic_well_data() (in module torx.plotting) plot_separatrix() (in module torx.plotting) plot_target() (in module torx.plotting) plot_wall() (in module torx.plotting) PoincarePolygonSet (class in torx.geometry) point_inside() (OrderedPolygon2D method) (Polygon2D method) (Polygon3D method) points (Mesh property) points_boundary (Mesh property) points_ghost (Mesh property) points_inner (Mesh property) points_inside() (OrderedPolygon2D method) (Polygon2D method) (Polygon3D method) points_to_polars() (Polars method) points_within_grid() (Grid2D method) (Multigrid2D method) polar_to_cart_chord() (in module torx.analysis) Polars (class in torx.specializations.grillix) poloidal_arc_length() (FluxSurfaceLineout method) (Lineout method) (XPointLineout method) poloidal_flux() (NumericalEquilibrium method) (RawNumericalEquilibrium method) poloidal_incidence() (FluxSurfaceLineout method) (Lineout method) (XPointLineout method) poloidal_integration() (MagneticFieldTracer method) poloidal_integration_equation() (MagneticFieldTracer method) poloidal_magnetic_field_interpolator (NumericalEquilibrium property) (RawNumericalEquilibrium property) poloidal_vector() (in module torx.vector) poloidal_vector_magnitude() (in module torx.vector) Polygon2D (class in torx.geometry) Polygon3D (class in torx.geometry) positive() (TArray method) power() (TArray method) prod() (TArray method) project_vector_to_magfield() (CircularEquilibrium method) (CircularToroidalEquilibrium method) (DommaschkEquilibrium method) (EquilibriumBaseClass method) (FlareEquilibrium method) (NumericalEquilibrium method) (RawNumericalEquilibrium method) (SalphaEquilibrium method) (SlabEquilibrium method) prolong() (Multigrid2D method) psi_axis (NumericalEquilibrium property) (RawNumericalEquilibrium property) psi_data (NumericalEquilibrium property) (RawNumericalEquilibrium property) psi_interpolator (NumericalEquilibrium property) (RawNumericalEquilibrium property) psi_separatrix (NumericalEquilibrium property) (RawNumericalEquilibrium property) psi_units (NumericalEquilibrium property) (RawNumericalEquilibrium property) Q qbwd (Map property) (Map3D property) qfwd (Map property) (Map3D property) quantile() (TArray method) Quantity (in module torx.normalization) (in module torx.units) qval() (CircularEquilibrium method) (CircularToroidalEquilibrium method) (SalphaEquilibrium method) R R0 (CircularEquilibrium property) (CircularToroidalEquilibrium property) (DommaschkEquilibrium property) (EquilibriumBaseClass property) (FlareEquilibrium property) (Grid2D property) (Multigrid2D property) (NumericalEquilibrium property) (RawNumericalEquilibrium property) (SalphaEquilibrium property) (SlabEquilibrium property) r_points (FluxSurfaceLineout property) (Lineout property) (LineoutSet property) (XPointLineout property) r_s (Grid3D property) (Mesh property) r_source (LineoutSet property) r_u (Grid3D property) (Mesh property) rad_heatflux_dia() (in module torx.measure.fluid) rad_heatflux_em_e() (in module torx.measure.fluid) rad_heatflux_em_i() (in module torx.measure.fluid) rad_heatflux_ExB() (in module torx.measure.fluid) rad_particleflux_dia() (in module torx.measure.fluid) rad_particleflux_em_e() (in module torx.measure.fluid) rad_particleflux_em_i() (in module torx.measure.fluid) rad_particleflux_ExB() (in module torx.measure.fluid) radenv() (CircularToroidalEquilibrium method) radial_electric_field() (in module torx.measure) radial_incidence() (FluxSurfaceLineout method) (Lineout method) (XPointLineout method) radial_line_chord() (in module torx.analysis.lineouts) radial_magnetic_field_fluctuation() (in module torx.measure) radial_perpendicular_gradient() (FluxSurfaceLineout method) (Grid2D method) (Lineout method) (Multigrid2D method) (XPointLineout method) radial_unit_vector_points_outwards() (CircularEquilibrium method) (CircularToroidalEquilibrium method) (DommaschkEquilibrium method) (EquilibriumBaseClass method) (FlareEquilibrium method) (NumericalEquilibrium method) (RawNumericalEquilibrium method) (SalphaEquilibrium method) (SlabEquilibrium method) RateCoefficient (class in torx.specializations.reax) RawNumericalEquilibrium (class in torx.equilibrium) read_aug_shotfile() (in module torx.specializations.aug) read_eqdsk_file() (in module torx.equilibrium.io) read_fortran_namelist() (in module torx.fileio) read_from_json() (in module torx.fileio) read_kisslinger_flux_surfaces() (in module torx.equilibrium.io) read_matlab_struct() (in module torx.fileio) read_netcdf_equilibrium() (in module torx.equilibrium.io) read_params_from_filepath() (in module torx.specializations) read_params_from_filepath_genex() (in module torx.specializations.genex) read_params_from_filepath_grillix() (in module torx.specializations.grillix) read_xml_file() (in module torx.equilibrium.io) real() (TArray method) reciprocal() (TArray method) recursive_rename_keys() (in module torx.fileio) redblack_indices (Mesh property) reindex() (TArray method) repeat_first_point() (OrderedPolygon2D method) (Polygon2D method) resample() (OrderedPolygon2D method) reset_interpolator() (PoincarePolygonSet method) restrict() (Multigrid2D method) return_as_simple() (OrderedPolygon2D method) (Polygon2D method) rho (EquiOnMesh property) (Polars property) rho() (FluxSurfaceLineout method) (Lineout method) (PoincarePolygonSet method) (XPointLineout method) rho_interp (PoincarePolygonSet property) rho_max (NumericalEquilibrium property) (RawNumericalEquilibrium property) rho_min (NumericalEquilibrium property) (RawNumericalEquilibrium property) rho_s0 (Normalization property), [1] rhopol_max (Polars property) rhopol_min (Polars property) rhostar (Normalization property), [1] rint() (TArray method) rms() (in module torx.analysis) roll() (TArray method) rot() (in module torx.operators) round() (TArray method) rz_integration() (MagneticFieldTracer method) (VectorFieldTracer method) rz_integration_equation() (MagneticFieldTracer method) (VectorFieldTracer method) S safety_factor() (NumericalEquilibrium method) (RawNumericalEquilibrium method) SalphaEquilibrium (class in torx.equilibrium) save_aug_shotfile() (in module torx.specializations.aug) scalar_projection() (in module torx.vector) search_for() (Hierarchy method) search_for_key() (Hierarchy method) search_for_value() (Hierarchy method) second_smallest() (in module torx.arrays) sel() (TArray method) sel_phi() (Grid3D method) serialize_norm_attrs() (in module torx.arrays) serialize_Quantity() (in module torx.normalization) (in module torx.units) set_chunk_limit() (in module torx.performance) set_cmap_oneside() (in module torx.plotting) set_cmap_twoside() (in module torx.plotting) set_code_name() (in module storx) (in module storx.hierarchy) set_custom_storage_path() (in module storx) set_dask_defaults() (in module torx.performance) set_default_port() (in module torx.performance) set_grid_limits() (in module torx.plotting) set_R0() (Grid3D method) set_run_name() (in module storx) set_serialization_target() (in module torx.normalization) (in module torx.units) set_silent() (in module storx) set_silent_load() (in module storx) set_spill_directory() (in module torx.performance) set_storage_partition() (in module storx) setup_filled_vector_to_matrix() (Grid2D method) (Multigrid2D method) setup_perpendicular_gradient() (Grid2D method) (Multigrid2D method) setup_vector_to_matrix() (Grid2D method) (Multigrid2D method) shape (Grid3D property) (TArray property) shape_single() (in module torx.grid) shift() (TArray method) shrink_grid() (in module torx.geometry) shrink_rectangle() (in module torx.geometry) sign() (TArray method) signed_area() (OrderedPolygon2D method) (Polygon2D method) sin() (TArray method) sinh() (TArray method) size (Mesh property) (TArray property) size_ghost_layer (Mesh property) size_neighbor (Mesh property) skew() (in module torx.analysis) SlabEquilibrium (class in torx.equilibrium) smooth_1d_block() (in module torx.analysis) smooth_1d_window() (in module torx.analysis) smooth_2d_butterworth() (in module torx.analysis) smooth_2d_ellipsoid() (in module torx.analysis) smooth_2d_gaussian() (in module torx.analysis) smooth_2d_uniform() (in module torx.analysis) smooth_surfaces() (PoincarePolygonSet method) smoothstep() (in module torx.analysis) sound_speed() (in module torx.measure) spacing_c (Mesh property) spacing_f (Mesh property) spline_basis_r (NumericalEquilibrium property) (RawNumericalEquilibrium property) spline_basis_z (NumericalEquilibrium property) (RawNumericalEquilibrium property) SplineInterpolator2D (class in torx.analysis) split_self_intersections() (OrderedPolygon2D method) (Polygon2D method) sqrt() (TArray method) square() (TArray method) squeeze() (TArray method) statistics() (FluxSurfaceLineout method) (Lineout method) (XPointLineout method) statistics_ufunc() (in module torx.analysis) std() (in module torx.analysis) (TArray method) store_dataset() (in module storx) storx module storx.hierarchy module subtract() (TArray method) sum() (TArray method) surface_area() (FluxSurfaceLineout method) (Lineout method) (XPointLineout method) surface_average() (Polars method) surface_integral() (FluxSurfaceLineout method) (Lineout method) (XPointLineout method) sys_call() (in module torx.performance) T tan() (TArray method) tangent_unit_vector (FluxSurfaceLineout property) (Lineout property) (XPointLineout property) tanh() (TArray method) target_mapped_distance() (Lineout method) (XPointLineout method) TArray (class in torx.arrays) tau_0 (Normalization property), [1] tau_e0 (Normalization property), [1] tau_e_norm (Normalization property), [1] tau_i0 (Normalization property), [1] tau_i_norm (Normalization property), [1] theta (Polars property) theta() (CircularEquilibrium method) (CircularToroidalEquilibrium method) (MagneticFieldTracer method) (SalphaEquilibrium method) theta_centered() (CircularEquilibrium method) (SalphaEquilibrium method) tic() (in module storx) to() (TArray method) to_lineout_set() (PoincarePolygonSet method) to_numerical() (RawNumericalEquilibrium method) to_ordered() (OrderedPolygon2D method) (Polygon2D method) tobase() (TArray method) toc() (in module storx) toroidal_integration() (MagneticFieldTracer method) (VectorFieldTracer method) toroidal_integration_equation() (MagneticFieldTracer method) (VectorFieldTracer method) toroidal_vector() (in module torx.vector) torx module torx.analysis module torx.analysis.fourier module torx.analysis.lineouts module torx.arrays module torx.decorators module torx.equilibrium module torx.equilibrium.io module torx.fileio module torx.geometry module torx.grid module torx.measure module torx.measure.fluid module torx.measure.gyrokinetic module torx.normalization module torx.operators module torx.performance module torx.plotting module torx.specializations module torx.specializations.aug module torx.specializations.flare module torx.specializations.genex module torx.specializations.grillix module torx.specializations.reax module torx.units module torx.vector module total_pressure() (in module torx.measure) total_temperature() (in module torx.measure) (in module torx.measure.gyrokinetic) trace() (FastTracer method) trace_multiple_points() (in module torx.analysis) trace_reverse() (MagneticFieldTracer method) transpose() (TArray method) trapezoid() (TArray method) trunc() (TArray method) U unit (TArray property) unit_vector() (in module torx.vector) upsample_psi() (RawNumericalEquilibrium method) upscale_toroidal_resolution() (FluxSurfaceLineout method) V v_A0 (Normalization property), [1] valid_entry_exists() (in module storx) values (TArray property) values() (Hierarchy method) var() (TArray method) vector_cross() (in module torx.vector) vector_dot() (in module torx.vector) vector_magnitude() (in module torx.vector) vector_projection() (in module torx.vector) vector_rejection() (in module torx.vector) vector_to_matrix() (Grid2D method) (Mesh method) (Multigrid2D method) VectorFieldTracer (class in torx.analysis) verts (OrderedPolygon2D property) (Polygon2D property) volume() (FluxSurfaceLineout method) (Lineout method) (XPointLineout method) W w_iz() (AtomicData method) where() (TArray method) which_code() (in module torx.specializations) write_eqdsk_file() (in module torx.equilibrium.io) write_kisslinger_flux_surfaces() (in module torx.equilibrium.io) write_matlab_struct() (in module torx.fileio) write_netcdf_equilibrium() (in module torx.equilibrium.io) write_to_equi_file() (NumericalEquilibrium method) (RawNumericalEquilibrium method) write_to_json() (in module torx.fileio) write_xml_file() (in module torx.equilibrium.io) X x_point_r_norm (NumericalEquilibrium property) (RawNumericalEquilibrium property) x_point_z_norm (NumericalEquilibrium property) (RawNumericalEquilibrium property) xmin (Mesh property) xorder (Map property) XPointLineout (class in torx.analysis.lineouts) xpol (Polars property) Y ymin (Mesh property) yperiodic (Mesh property) ypol (Polars property) Z z_points (FluxSurfaceLineout property) (Lineout property) (LineoutSet property) (XPointLineout property) z_s (Grid3D property) (Mesh property) z_source (LineoutSet property) z_u (Grid3D property) (Mesh property) zeta (Normalization property), [1]
